BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B04SP1|AL427431
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1840 0.0
>3x_Contig1578
Length = 13178
Score = 1840 bits (927), Expect = 0.0
Identities = 932/935 (99%)
Strand = Plus / Minus
Query: 1 tagtcaactagaatgtataaagctttgctatcatttcttacgttcacgggatgttctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11150 tagtcaactagaatgtataaagctttgctatcatttcttacgttcacgggatgttctcag 11091
Query: 61 tcaatctcccctgtatctacaatatatatctacaatgttcatactatttttatccgctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11090 tcaatctcccctgtatctacaatatatatctacaatgttcatactatttttatccgctat 11031
Query: 121 ttgcggaactgacaaaacatgcattatttccatgtatgcacaattagacgcttccgtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11030 ttgcggaactgacaaaacatgcattatttccatgtatgcacaattagacgcttccgtctc 10971
Query: 181 ctgtattttcgaccctctttttttttgaaatttttggtttttcatccgcatttctttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10970 ctgtattttcgaccctctttttttttgaaatttttggtttttcatccgcatttctttttt 10911
Query: 241 ttttgctactgagatgctgctcgaggacggaagactacatctactgcgcatttgacgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10910 ttttgctactgagatgctgctcgaggacggaagactacatctactgcgcatttgacgcat 10851
Query: 301 ctcgaacggatgttatgctgtttttaggctattcaaacggcactgccgtgtgtcaataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10850 ctcgaacggatgttatgctgtttttaggctattcaaacggcactgccgtgtgtcaataga 10791
Query: 361 gagttggcgttcgaccgaccaatttacgtactagcatccattcaaattaaagttgtttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10790 gagttggcgttcgaccgaccaatttacgtactagcatccattcaaattaaagttgtttcg 10731
Query: 421 atgcaaagcgggatgaaaggttcatccgacccaagaatgagcattgttttcccgtttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10730 atgcaaagcgggatgaaaggttcatccgacccaagaatgagcattgttttcccgtttaca 10671
Query: 481 actggctatagttcgatatatccttgtgtctaatgttcatcactctcagttaataatcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10670 actggctatagttcgatatatccttgtgtctaatgttcatcactctcagttaataatcaa 10611
Query: 541 gatacacttcatctcgatatagtttggaataaccaattaagaratgttatgcctctccgt 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10610 gatacacttcatctcgatatagtttggaataaccaattaagaaatgttatgcctctccgt 10551
Query: 601 ttaagatcttgatttggtgtgtggcatctcatggttctattgttgaagctccataggtgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10550 ttaagatcttgatttggtgtgtggcatctcatggttctattgttgaagctccataggtgc 10491
Query: 661 tatcagttttacttgtatactgtgttcacacctcatctatgctgcgttaccacatgttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10490 tatcagttttacttgtatactgtgttcacacctcatctatgctgcgttaccacatgttct 10431
Query: 721 tggtgttctggtggaaagatgtcccgctgtattgaacttctttttctctaaccataatac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10430 tggtgttctggtggaaagatgtcccgctgtattgaacttctttttctctaaccataatac 10371
Query: 781 tagaaggaatttaatcattaggtactctaaaaaaagaaagactatgccaacattactgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10370 tagaaggaatttaatcattaggtactctaaaaaaagaaagactatgccaacattactgac 10311
Query: 841 tcccaggcacttcgccacatcgtttgagttatttaagaacagccgctttcgttttagcat 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10310 tcccaggcacttcgccacatcgtttgagtaatttaagaacagccgctttcgttttagcat 10251
Query: 901 tgtgtcacatccattttgctgaaaatggktattat 935
|||||||||||||||||||||||||||| ||||||
Sbjct: 10250 tgtgtcacatccattttgctgaaaatggttattat 10216
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8259
Number of Sequences: 1807
Number of extensions: 8259
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)